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Since patches sometimes change .gitignore and .travis.yml, it's desirable to install them along with everything else if a resource needs patching. Also, for resources that are git respositories, this allows install to interact with git objects other than the commit specifically checked out. More generally, this may help to avoid subtle issues by preserving the fidelity of resources in cases where invisible dot files play a functional role. Closes #329. Signed-off-by: ilovezfs <ilovezfs@icloud.com>